1 My thoughts on scientific writing

Writing is a crucial part of scientific work, no matter you are a PhD student, a researcher in industry, or a professor in academia. In my opinion,
writing = storytelling = advertising

that is, writing a paper (proposal) is to tell a story, which is a way to sell/advertise your work (idea). I personally think storytelling is a very important skill in all industries, which requires domain knowledge, logic thinking, and good communication. In academia, in particular, the ability of storytelling is reflected through your writing. This is the key reason I want to share this lecture here.

Before getting started, I have to say that I am not an experienced scientific writer. I came to the US in 2018 to pursue my PhD and had little knowledge about scientific writing (especially in English) before then. But I have been putting attention on training and improving my writing skills. Some people may think that native speakers have natural advantages in paper writing since English is their mother language. I do not entirely agree, however. Native speakers are better at daily communication but not necessarily scientific writing. One needs learning and training to gain good scientific writing skills. I hope this may boost confidence for those non-native speakers, more or less.

2 Key components in scientific writing

There are many references/books that you can find online to teach you how to improve your scientific writing. Different people provide different suggestions/thoughts from different perspectives. Here I would like to share my own opinion, which is more applicable to paper/grant writing in academia, particularly in statistics/biostatistics. Also, it is not the golden standard. Please take whatever you like and ignore (or share your thoughts on) those you disagree with.

When I write a paper, there are four factors that I care the most, including structure, consistency, diversity, and visualization. I will discuss them on by one in the following.

2.1 Structure

Structure is the key to the success of your writing. It is a reflection of your logic thinking. The goal of your writing is to lead your readers, following YOUR logic, to where you want them to go. To a large degree, whether you can make your readers convinced depends on the structure of your writing, assuming there are no technical issues and your results are good.

When writing a paper, I always start with thinking about the structure of my paper. Generally speaking, the structure of a paper should have multiple layers, starting from sections (the outermost layer) to sentences (the innermost layer).

Setting up sections is a easy task in my opinion since many journals require a fixed structure of a paper. Once you decide which journal you will submit your paper to, you can go to the journal’s website and search for `Instructions for authors’ (or ‘Manuscript preparation’, or similar names) to get the general format or a template of the manuscript. That gives you the needed sections in your paper. Typically, Introduction, Method, Results, and Discussion are the four sections must to have in a paper (names may vary slightly). Additional sections are required according to different journals or based on the authors’ design of the paper.

Next, we address the structure of the remaining inner layers.

2.1.1 Structure of a section

After you decide the highest level of the structure of your paper (i.e., sections), the next step is to think about the structure of each section. The structure of the Method and Results sections are typically case by case and much easier to address than that of the Introduction and Discussion sections. Hence, I would like to share my preferences on the structure of the latter ones. Again, they are options but not standards.

Structure of the Introduction section

  • Start with the problem, either the scientific problem (see my DeMixSC paper) or the mathematical problem (see my 1-bit paper)

  • State clearly the current gap (literature review) and the impact (why the problem is important and needs to be solved)

  • Your contributions and achievements

  • Organization of your manuscript (a typical paragraph in a statistical manuscript).

Structure of the Discussion section

  • Summarize what you have done (typically start with the gap you bridged and repeat your contributions!!!)

  • Weakness of your work or what you have not done (both lead to future research)

2.1.2 Structure of a paragraph

After we set the structure of a section, we need to think about how many paragraphs are needed in this section. This requires us to first set up the central information (i.e. the topic sentence) that we want to express in each paragraph. A typical structure of a paragraph that I use is as follows:

  • First sentence (topic sentence) to express the central information

    If this paragraph is closely related to the previous paragraph, always use some conjunction to make your paragraphs well connected. See paragraph 2 in DeMixSC.

  • Follow-up evidence to support the central information

  • Last sentence to summarize what is important and hint the next paragraph if applicable

    See paragraph 2 in DeMixSC.

2.1.3 Structure of a sentence

The structure of a sentence is very often oversighted by many people. Indeed, not every sentence’s structure has a significant impact on the information it delivers, but some do. See below the two compared sentences.

(1). Our proposed method produced the highest estimation accuracy, but it requires a longer computational time than the other methods.

(2). Though requiring a slightly longer computational time, our proposed method produced the highest estimation accuracy among all the compared methods.

The difference between (1) and (2) is their emphasis. Sentence (1) emphasizes the computational time (‘but’ is a indicator of what you want to emphasize), while sentence (2) emphasizes the highest accuracy (‘though’ is the part to be deemphasized).

Reminder: ALWAYS emphasize your strengths and weaken your weaknesses using your writing skills!!!

2.2 Consistency

Consistency is the key to making your paper readable and professional. Consistency is not creative work but very much needs your carefulness. Below I summarize consistency required in different aspects but may miss out some. Please feel free to let me know if you think of other aspects that are not covered below.

2.2.1 Consistency in format

  • Capitalization in titles, including sections, subsections, tables, and figures

  • Indent and line spacing (be very careful if you do not use Latex)

  • Format of references (even if you use bibtex, very often to be oversighted)

2.2.2 Consistency in text

  • Font size

    Consistency of the font size across paragraphs, tables, figures, and references.

  • Name

    Foe example, Lasso v.s. LASSO, technological discrepancy v.s. technical discrepancy, MuSiC2 v.s. MuSiC2.0.

  • Caption

    Same format for all captions (in bold? font size? Starting with a verb or noun?).

  • Tense

    Keep the tense consistent for similar expressions. For instance, description of expriments is usually in the past tense.

2.2.3 Consistency in math

  • Notations

    Better to have a paragraph clarifying how to denote different mathematical concepts (vectors, matrices, sets, norms, etc.).

  • Label

    Same label format for your equations. (1) v.s. (1.1).

  • Symbols

    Same symbol for the same notation. E.g., \(|\) v.s. \(\mid\) v.s. \(\vert\) to denote conditioned on.

Question: I left one consistency issue on purpose in this subsection, can you spot it? (Hint: singular or plural)

2.3 Diversity

Diversity is the key to the beauty of your writing. Eventually, we want our papers not only readable but also enjoyable to read. An effective way to achieve that is to diversifying our writing.

2.3.1 Diversity in words

  • Verb

    Verbs are very important in your writing. Make sure the verbs you choose can accurately (better vividly) deliver your message.

    • Fig 1 shows … Fig 2 shows… v.s. Fig 1 shows…, Fig 2 demonstrates/depicts/illustrates…

    • A follows the same trend with B v.s. The trend in A mirrors the trend in B.

  • Adjective/adverb

    Adjectives and adverbs make your writing precise.

    • Slightly, moderately, considerably, notably, significantly.
  • Conjunction

    Conjunctions make your writing well connected.

    • However, nevertheless, yet.

    • Hence, therefore, consequently.

2.3.2 Diversity in phrases

  • Prepositional phrase

    • On the contrary, in contrast, on the other hand.

    • To that end, to achieve this, for that purpose.

2.3.3 Diversity in sentence patterns

Improving the diversity in sentence patterns makes your writing not boring. For example, in the Results section, do not always use clauses like ‘A produced a lower estimation error, which indicates that ….’. You can write ‘The lower estimation error achieved by A suggests…’.

But here I have to say that in some cases, we do want to keep the sentence pattern consistent. For example, when we introduce the existing methods in a specific field, we can use a consistent sentence pattern like ‘Liu (2023) proposed a … method by … to solve some problem/achieve some goal’.

2.4 Visualization

Visualization plays a crucial role in scientific writing. One figure can deliver a lot of information. Making beautiful figures/graphs is not easy, but at least we can make them clear and professional without too much effort. Below are some rules/tips for visualization.

  • Make everything (text, numbers, etc.) in the figures look comparable as the main text

  • Do NOT make your figure overloaded (e.g., too many colors/line styles/shapes)

  • Do NOT make your figure out of the page margins

  • Do NOT have typos in the figure title

    Of course, we should not have any typo anywhere, but typos in the title are particularly unacceptable since they are too obvious for readers to spot.

  • Some reference posts for making high-quality figures

    https://dgleich.wordpress.com/2013/06/04/creating-high-quality-graphics-in-matlab-for-papers-and-presentations/

3 General rules for scientific writing

When it comes to scientific writing, there are some general rules/conventions that people would follow. Below are some that I have learned from my advisors and collaborators.

4 AI for scientific writing

Artificial intelligence (AI) opens many doors to improve the efficiency of scientific work, though it brings many challenges in the meantime. I personally consider AI as a valuable aid in scientific writing, as long as we can use it responsibly. Here is how I currently use AI for improving my writing skills. I believe I will refine this part as I become more familiar with AI tools and as the AI tools are further developed.

5 My personal habits to improve writing

As mentioned at the beginning, I have been putting attention and effort on improving my writing skills. Below are some habits that I have developed and found to be helpful.

6 Words in the end

Improving writing skills takes time and effort. I am still in the process and will possibly be in the process the whole career life. In my view, the key to improving your writing is whether you have the consciousness. If you do want to improve your writing quickly, be conscious about it. You can learn anytime you read or write. So, let’s keep conscious about writing and keep learning!

Please contact me if you have any comments on what I shared here. I will keep updating this document.